INFLAMMATION IS A “HOT” TOPIC IN MEDICINE. It appears connected to almost every known chronic disease — from heart disease to cancer, diabetes to obesity, autism to dementia, and even depression. Other inflammatory diseases such as allergies, asthma, arthritis, and autoimmune disease are increasing at dramatic rates. As physicians we are trained to shut off inflammation with aspirin, anti-inflammatory medication such as Advil or Motrin, steroids and increasingly more powerful immune suppressing medication with serious side effects. But we are not trained to find and treat the underlying causes of inflammation in chronic disease. Hidden allergens, infections, environmental toxins, an inflammatory diet, and stress are the real causes of these inflammatory conditions.
Autoimmune diseases, specifically, now affect 24 million people and include rheumatoid arthritis, lupus, multiple sclerosis, thyroid disease, inflammatory bowel disease, and more. These are often addressed by powerful immune suppressing medication and not by addressing the cause. That’s like taking a lot of aspirin while you are standing on a tack. The treatment is not more aspirin or a strong immune suppressant, but removing the tack.
It you want to cool off inflammation in the body, you must find the source. Treat the fire, not the smoke. In medicine we are mostly taught to diagnose disease by symptoms, NOT by their underlying cause. Functional medicine, the emerging 21st paradigm of systems medicine teaches us to treat the cause, not only the symptoms, to ask the question WHY are you sick, not only WHAT disease do you have.
I recently participated in a group discussion with a conventional doctor, a rheumatologist, and patient with an autoimmune disease, and one of my patients who was cured of a complex autoimmune disease by addressing the causes. The focus of the other doctors, however, was on how to suppress the inflammation with medication, not finding and treating the cause. Functional medicine is a different way of thinking about disease that helps us understand and treat the real causes of inflammation instead of finding clever ways to shut it down. Medicine as it is practiced today is like taking the battery out of a smoke detector while a fire burns down your house!
Autoimmune conditions are connected by one central biochemical process: A runaway immune response also known as systemic inflammation that results in your body attacking its own tissues.
When my patient described how he cured his autoimmune disease by finding and eliminating the causes of inflammation in his diet and environment, it was dismissed as a “spontaneous remission.” In the face of a paradigm-shattering medical case, these docs were hardly curious and quickly dismissive, describing what was shared as anecdotal.
My patient on that panel, a hard-working 46-year old father of three was once so inflamed he could barely function. By treating the underlying causes of his inflammation he is now in vibrant good health, enjoying his life with his kids and fully capable of caring for them.
Stories like these (and the many others I have shared in my blogs, books, and on television) are not anecdotes but a giant compass pointing us in the direction we should be looking to find answers to our health problems.
In today’s blog, I will explain what autoimmunity is, how inflammation spirals out of control, describe some of the underlying causes for these fires in the body, and provide you with nine steps to cool the fires of inflammation and overcome conditions that range from allergies to arthritis and more.
Autoimmunity: What it is and How it Occurs
We are facing an epidemic of allergic (60 million people), asthmatic (30 million people) and autoimmune disorders (24 million people). Autoimmune diseases include rheumatoid arthritis, lupus, multiple sclerosis, psoriasis, celiac disease, thyroid disease, and the many other hard-to-classify syndromes in the 21st century. These are all autoimmune conditions, and at their root they are connected by one central biochemical process: A runaway immune response also known as systemic inflammation that results in your body attacking its own tissues.
Your immune system is your defense against invaders. It is your internal army and has to clearly distinguish friend from foe — to know you from other. Autoimmunity occurs when your immune system gets confused and your own tissues get caught in friendly cross-fire. Your body is fighting something — an infection, a toxin, an allergen, a food or the stress response — and somehow it redirects its hostile attack on your joints, your brain, your thyroid, your gut, your skin, or sometimes your whole body.
This immune confusion results from what is referred to as molecular mimicry. Conventional approaches don’t have a method for finding the insult causing the problem. Functional medicine provides a map to find out which molecule the cells are mimicking.
Interestingly, autoimmune disorders occur almost exclusively in developed countries. People in poor nations without modern amenities like running water, flush toilets, washing machines, and sterile backyards don’t get these diseases. If you grew up on a farm with lots of animals, you are also less likely to have any of these inflammatory disorders. Playing in the dirt, being dirty, and being exposed to bugs and infections trains your immune system to recognize what is foreign and what is “you.”
In this country, autoimmune diseases when taken all together are a huge health burden. They are the eighth leading cause of death among women, shortening the average patient’s lifespan by eight years. The annual health care cost for autoimmune diseases is $120 billion a year representing nearly twice the economic health care burden of cancer (about $ 70 billion a year). (i)
Unfortunately, many of the conventional treatments available can make you feel worse. Anti-inflammatory drugs like Advil, steroids, immune suppressants like methotrexate, and the new TNF-alpha blockers like Enbrel or Remicade can lead to intestinal bleeding, kidney failure, depression, psychosis, osteoporosis, muscle loss, and diabetes, not to mention overwhelming infection and cancer.(ii)
When used selectively these drugs can help people get their lives back. But they are not a long-term solution. They shouldn’t be the end of treatment, but a bridge to cool off inflammation while we treat the root cause of the disease.
There is another way to deal with autoimmune conditions. Let me share the same story I told the doctors on that panel.
Recovering from Autoimmunity: Addressing the Root Causes of Inflammation
My patient Sam ended up on a long misadventure through the medical system before he came to see me. For years he went from doctor to doctor getting all kinds of labels for his problems but no real help in treating them.
This hard-working, once healthy trade professional had suddenly developed a series of inflammatory conditions including chronic sinus and prostate infections. Many doctors gave him many antibiotics for these infections.
Shortly thereafter, he developed severe chest pains and went to the emergency room. While he was there, doctors found swollen lymph nodes and told him he had lymphoma, a form of cancer. For three weeks he lived in despair until the biopsy results came back. It turned out he didn’t have cancer but an autoimmune disease. Which autoimmune disease? The doctors weren’t quite sure …
He had many abnormal blood test results — like low white blood cell and platelet counts, high levels of auto-antibodies of all types (antibodies that attack our own tissues), high immunoglobulins (the foot soldiers of the immune system), and autoimmune thyroid disease. But doctors had a hard time putting their finger on what was wrong. They couldn’t label him.
Meanwhile, Sam developed metabolic syndrome and weight gain (pre-diabetes) as a result of the runaway inflammation in his body.
Here is a quote from one his specialist’s notes:
“Whether he has lupus or Sjogren’s syndrome is a bit unclear. Regardless, he merely needs observation and no therapeutic intervention at this time.”
This unfortunately is all to common. What exactly did they plan to observe, how bad he felt? Or would they just wait for him to get worse before intervening?
That’s when he came to me. Using a functional medicine approach, a new way of thinking about the underlying causes and imbalances in chronic disease, I began by asking Sam some simple questions. Then I went hunting for toxins, allergens, and infections — all common causes of inflammation — and found the real causes of his symptoms. He had taken so many antibiotics that altered his gut flora or bacteria and promoted yeast overgrowth. Fungus and yeast flourished in his body, growing between his toes, on his toenails, in his crotch, and scalp. He had Helicobacter pylori bacteria in his gut. He had a leaky gut and reacted to many foods, including dairy and gluten. He was exposed to toxins at his job and had high levels of mercury. And he had chronic sinus infections.
So we went to work cleaning house. I treated his yeast with anti-fungals and the H. pylori with antibiotics, got rid of his food allergies, fixed his gut, detoxified him from metals, and cleaned up his sinuses. Then I helped heal his immune system by supporting it with nutrients. I gave him zinc, fish oil, vitamin D, herbs, and probiotics, and put him on a clean, whole-foods, allergen free, anti-inflammatory diet.
At his next follow-up visit, I asked Sam how he was doing, expecting him to say that he felt a little better. However, his response surprised even me. He said he felt fine.
“What about the fatigue?” I asked.
“I have great energy.”
“What about the bloating and gas?”
“Nope.”
“What about the reflux?”
“Gone.”
“What about your sinuses and chronic phlegm?”
“All clear.”
“What about your memory and concentration problems?”
“All better.”
And he lost 15 pounds.
When his labs came in, they confirmed what he told me — they were all back to normal. His white cells increased and his immune markers calmed way down.
Sam’s results simply reflect the application of a new model of thinking about problems called Functional medicine — it’s a way to get to the root of health problems and treat the underlying causes of what ails you instead of suppressing symptoms with medications.
If you have an autoimmune disease, here is what you need to think about and do.
Nine Steps to Treating Autoimmune Disease
- Check for hidden infections — yeast, viruses, bacteria, Lyme, etc. — with the help of a doctor, and treat them.
- Check for hidden food allergens with IgG food testing or just try The UltraSimple Diet, which is designed to eliminate most food allergens.
- Get tested for celiac disease, which is a blood test that any doctor can do.
- Get checked for heavy metal toxicity. Mercury and other metals can cause autoimmunity.
- Fix your gut. For details, see my blog on irritable bowel syndrome.
- Use nutrients such as fish oil, vitamin C, vitamin D, and probiotics to help calm your immune response naturally.
- Exercise regularly — it’s a natural anti-inflammatory.
- Practice deep relaxation like yoga, deep breathing, biofeedback, or massage, because stress worsens the immune response.
- Tell your doctor about Functional medicine and encourage him or her to get trained — go to www.functionalmedicine.org for more information and to get a copy of the Textbook for Functional Medicine.
Give these steps a try — and see if you don’t start feeling less inflamed. As I said earlier, the answers are right in front of you. Treat the underlying causes of your illness and you will begin to experience vibrant health once more.
Now I’d like to hear from you…
Have you been diagnosed with an autoimmune disease?
How is your doctor treating you?
Have you been frustrated by the medical advice that you’ve been given?
What steps have you taken to get to the root of the problem, and what have your results been?
Please leave your thoughts by adding a comment below.
References
(i) Nakazawa, D. (2008). The Autoimmune Epidemic. Simon & Schuster. New York.
(ii) Siegel, C.A., Marden, S.M., Persing, S.M., et al. (2009). Risk of lymphoma associated with combination anti-tumor necrosis factor and immunomodulator therapy for the treatment of Crohn’s disease: a meta-analysis. Clin Gastroenterol Hepatol. 7(8): 874-81.
















Hi Donna,
Thank you for sharing about your journey with MG. Yes, heed the advice in the article! You can start implementing an elimination diet which will help you remove gluteb among other potential allergens. Check it out for more info: http://store.ultrasimplediet.com/
Often, gluten is seen as an allergen or sensitivity with a few other symptoms of autoimmune. Your diet sounds really good though so keep it up!
In good health
Lizzy
Hi Ellvira,
Thank you for sharing your concerns re: psoriasis. It is a good idea to focus on an anti inflammatory diet- lots of fresh, organic (if possible) vegetables and fruits, low glycemic carbohydrates (whole grains and starches- sweet potato, beet etc.), lean protein, omega 3 fats from walnuts, flax seed, salmin, sardines and herring, nuts, seeds, legumes and beans, green tea, turmeric, onion, garlic, other spices and such. Most of all, an elimination diet which removes potentially harmful foods which might be irritating your GI tract and flaring up your immune system is a great idea. Check this out for more info: http://store.ultrasimplediet.com/ At the very least, try experimenting with going gluten and dairy free for 1-2 weeks and ensure proper intake of omega 3 fish oil, probiotic, high quality multivitamin, magnesium and vitamin D!
In good health
Lizzy
Hi Heather,
Thank you for sharing your health concerns. It might be better to offer your system a reprive from all the digestive work by taking some cooked foods yoo. The balance between raw and cooked is important and might provide you some relief. Have you tried digestive enzymes and have you removed gluten or other potentially allergenic foods? You are doing a raw vegan diet, how is your nutrition intake? Are you taking a multivitamin, vit D, fish oil or omega 3 fatty acid?
In order to provide you the proper care you need we hope you will seek the attention of a local qualified Functional Med practitioner soon. To locate a doctor who practices functional medicine like Dr. Hyman, go to http://www.functionalmedicine.org/findfmphysician/index.asp and scroll down to where it says “locate a practitioner” and enter your zip. Progress accordingly from there.
To make an appointment at Dr. Hyman’s UltraWellness Center in Lenox, MA please go to: http://www.ultrawellnesscenter.com/becoming-a-patient/ When you are finished reading through the material you may call the office at After you have reviewed this, please contact our office to make an appointment. By phone, (413) 637-9991; by email, office@ultrawellnesscenter.com
In good health
Lizzy
I have been struggling with sinusitis for 18 years. I have taken so many antibiotics over the years, that now only levequin works. I usually have to take a diflucan with the antibiotics, because I usually get a yeast infection. I had surgery years ago, and felt it only helped for a few years. I have had some testing and my cortisol levels are low, and my platelet count has been 100-118 for the last 5 years since I was pregnant. I am trying a gluten free diet now and after a week, no change has occurred yet. I am going to have more food allergy testing done within the month. I eat pretty healthy and take probotics, adrenal support and B vitamins. I am wondering if my sinus infections have been fungal and the antibiotics are really not helping. I had 5 infections in the last year, and would love any advice or direction you could give. Thanks, Natalie
Hi My name is Jennifer Iam a 31 year old female and a mother of a two year old little girl and I was recently diagnosed with Sarcoidosis. My doctor currently has me on prednisones and a pump for everyday use, and a back up pump of albuterol in case of an emergency. However I am not happy with this diagnoses, there are to many inconsistent findings in my reports. They have ruled out all other diseases by taking a biopsy and still believe it is sarcoids based on what my lymphnodes look like but no other testing has backed up this diagnoses. for one all my blood work is normal. I don’t have any medical conditions, no low cell numbers, no irregular heart beat etc. They also didn’t find any bacteria in my lymphnodes, they didn’t find anything attacking me. they are just extremely large nodes with nothing going on. It hasn’t effected my lung tissue. Also I made my doctor take a vitamin D test and they found that it was low and so was my calcium, in sarcoids the two factors are high levels of vitamin d and high levels of calcium. When one has sarcoids your suppose to stay out of the sun and stay away from dairy. My test show otherwise. I have since sought out the help of a homeopathic doctor because I don’t believe what they are telling me. I think its the easiest answer they can come up with without doing further research. my homeopathic doctor has me taking certain herbal remedies and I as well follow an anti inflammatory diet and exercise regularly again. I would like to get off the steroids because of what it does to your body but I am scared that if I do that and I don’t know the severity of what I have that it can get worse faster. What more can I do?
Hi, my name is chantal. Where to begin? My mom past away with Ms. Now I’m a mother of a 4 year old daughter. I haven’t been diagnosed. But My symptoms are getting worst. It mostly started when I got pregnant. Extreme low blood pressure, extreme tiredness, sore muscle in the legs, can’t go up stairs. lower back pain and bladder inconstancy, skin rashes and muscle spasm. Being a witness of my mothers I see a coincidence. Also my grandmother had hearth problems. I remember my she also had skin conditions all over her body. My worry is my daughter. I don’t want to past this on to her. I know it’s nutrition but where do I begin?
For myself and my daughter? I came a across some research saying that all autoimmune disorders are related. That one in the family could of had lupus and than the daughter Ms. They are finding many cases like this.